PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han003563
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family ERF
Protein Properties Length: 183aa    MW: 20086.3 Da    PI: 5.0201
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S18717641PU_refUnigeneView CDS
PUT-169a-Helianthus_annuus-41087PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.72.5e-0711382855
        AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55
               +k  +lg+f t eeAa+a++ a+ k++g
  Han003563 11 NKDLYLGTFSTQEEAAEAYDVAAIKFRG 38
               5999*********************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.287146IPR001471AP2/ERF domain
SMARTSM003801.5E-13152IPR001471AP2/ERF domain
CDDcd000187.12E-16548No hitNo description
SuperFamilySSF541715.49E-11948IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.9E-131046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
GIRPLWPLDR NKDLYLGTFS TQEEAAEAYD VAAIKFRGVN AVTNFDISRY NVKKIIASST  60
LLAGELARRT KDVDTTTELL SDQPPAQNGE PKTISTEHTT NRNMLDWKMT LYDQNQTGPG  120
LDVDETTKLG AHLSNASSLV TSLSSSREDS PERNSSRDAW FPTAAAAAQM RAHIPVFAAW  180
ADA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.2810.0embryo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016467673.14e-53PREDICTED: AP2-like ethylene-responsive transcription factor ANT isoform X1
RefseqXP_016467674.14e-53PREDICTED: AP2-like ethylene-responsive transcription factor ANT isoform X2
RefseqXP_016467675.12e-53PREDICTED: AP2-like ethylene-responsive transcription factor ANT isoform X3
TrEMBLM1BXJ92e-52M1BXJ9_SOLTU; Uncharacterized protein
TrEMBLA0A0V0IR367e-51A0A0V0IR36_SOLCH; Putative AP2-like ethylene-responsive transcription factor ANT-like
STRINGPGSC0003DMT4000552105e-52(Solanum tuberosum)
STRINGSolyc02g092050.2.13e-49(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-28AP2 family protein